?? AI for Sugarcane: Phenotyping with UAVs
UAV-based phenotyping supports more informed and proactive crop management decisions, ultimately improving yield and sustainability

?? AI for Sugarcane: Phenotyping with UAVs

Phenotyping sugarcane without UAVs faces significant challenges. Given the large scale of sugarcane fields, it's impractical to collect detailed and frequent data manually, leading to incomplete or inaccurate information. Additionally, traditional methods lack the high spatial and temporal resolution provided by UAVs.

Hence, today we will look at plant phenotyping for sugarcane with UAVs and further data processing using AI models.

UAVs equipped with multispectral cameras can quickly cover large fields, capturing high-resolution data that allows for detailed analysis of crop health and growth. The next three case studies explain the practical link between using drones and machine learning to get insights about sugarcane.

Mapping Gaps in Sugarcane Fields with UAV Imagery

Country: ???? Brazil

Published: 18 December 2021

This study evaluates the accuracy of using UAV RGB imagery to map gaps in sugarcane fields, focusing on the impact of flight height and pixel size on gap detection.

The study involved a series of flights using a DJI Phantom 4 UAV equipped with an RGB sensor (DJI Zenmuse X3 camera) to capture images of sugarcane fields at various heights (0.5m, 0.9m, 1.0m, 1.2m, and 1.7m) and pixel sizes (3.5cm, 6.0cm, and 8.2cm).

This study employs artificial intelligence to create orthomosaic maps, identify and segment low-intensity pixels based on chromatic similarity and topological proximity, and distinguish plants from soil. The AI then iteratively identifies gaps, measures their dimensions, and converts this information into vectorial files for further analysis and validation

Key findings indicate that lower flight heights and smaller pixel sizes significantly improve the accuracy of gap detection. For instance, a flight height of 0.5m with a pixel size of 3.5cm resulted in the most precise gap measurements, with an R2 value of 0.95 and a mean absolute error (MAE) of 0.24m.

These results demonstrate the potential of UAV imagery for precise agricultural monitoring.

Agricultural researchers, precision agriculture practitioners, and farm managers can practically apply these findings to enhance the accuracy of crop monitoring and management.

Main tools/technologies

  • UAVs (Unmanned Aerial Vehicles)
  • RGB cameras
  • Image analysis software
  • Linear regression analysis
  • Chromatic similarity and topological proximity algorithms

Illustrative information. (
Examples of a 2.5-m long gap. Columns represent the images captured at different heights, and lines represent the pixel sizes used to capture the images. All images refer to the same gap under different evaluation conditions. Source: Barbosa Junior et al., 2021


Sugarcane growth pattern. Each box represents plant growth at each sampling time. On average, plant height reached 0.5, 0.9, 1.0, 1.2 and 1.7 m for each sampling data, respectively. Source: Barbosa Junior et al., 2021
Scatterplots comparing field gap lengths and gap estimated by UAV images. The comparison corresponds to the plant’s height (rows: 0.5, 0.9, 1.0, 1.2 and 1.7 m), pixel size (columns: 3.5, 6.0 and 8.2 cm) and gap lengths (


Example of gap overlap caused by crop leaves. A 0.50-m ruler is in front of the gap. Source: Barbosa Junior et al., 2021
Mean absolute error (MAE) relative to estimated gaps by UAV image and field gaps. The error is also presented for all gaps together in the “Total” column, resulting in 7.5 m of gaps. Source: Barbosa Junior et al., 2021

Predicting Sugarcane Traits with UAVs

Country: ???? United States

Published: February 2023

This study explores the use of aerial imagery and machine learning to predict morpho-physiological traits in sugarcane, aiming to enhance breeding programs and crop management.

The research employed a DJI Matrice 600 Pro hexacopter equipped with a Pika-L 2.4 hyperspectral imaging sensor to capture images of sugarcane fields at various growth stages. Multiple machine learning algorithms, including gradient boosting regression trees (GBRT), random forest, and support vector regression, were evaluated using a five-fold cross-validation methodology. The study focused on predicting key traits such as:

  1. Leaf greenness (indication of leaf chlorophyll)
  2. Leaf Area Index (LAI)
  3. Normalized Difference Vegetation Index (NDVI)
  4. Plant height
  5. Number of millable stalks per hectare

Vegetation indices, particularly NDVI, were derived from the imagery and used as input features for the prediction models.

Key findings reveal that the GBRT model outperformed other algorithms in predicting sugarcane traits.

For plant height prediction, the model achieved mean absolute percentage errors (MAPE) ranging from 13.7% to 21.2% across different growth stages and crop cycles. The prediction of millable stalks per hectare was more accurate, with MAPE values between 8.6% and 13.4%. These results demonstrate the potential of combining UAV imagery with machine learning for non-invasive and efficient estimation of important sugarcane traits, which can significantly accelerate breeding programs and improve crop management decisions.

Sugarcane breeders, agronomists, and precision agriculture practitioners can practically apply these findings to enhance crop monitoring, selection processes, and yield prediction.

Main tools/technologies

  • Unmanned Aerial Vehicles (UAVs)
  • RGB and multispectral sensors
  • Machine learning algorithms (GBRT, random forest, SVR)
  • Vegetation indices (NDVI)
  • Python programming language
  • Five-fold cross-validation

Aerial view of Stage-IV plant cane field taken in July 2019 showing different genotypes planted in a randomized block design with six replications. Source: Poudyal et al., 2023
Overview of k-fold (5-fold) cross-validation for model evaluation. Source: Poudyal et al., 2023
The study's workflow, from data collection (light green) to data analysis, model generation, and evaluation (blue). Source: Poudyal et al., 2023
Gradient Boosting regression tree algorithm. Source: Poudyal et al., 2023
Mean, range, coefficient of variation (CV), and skewness of morpho-physiological traits (SPAD, plant height, leaf area index, stalks/ha and GreenSeeker NDVI) for first ratoon in Stage IV trial on different dates in Florida sugarcane cultivar development program in 2019. Source: Poudyal et al., 2023
Bland-Altman degree of agreement for the plant and first ratoon combined data showing the level of differences and average error of normalized difference vegetative index (NDVI) obtained from GreenSeeker vs UAV sensor. Source: Poudyal et al., 2023
Graph showing the correlation between yield (tons of cane per hectare, TCH) from both plant cane and first ratoon, and normalized difference vegetation index (NDVI) from UAV sensor with regression. Source: Poudyal et al., 2023
Graph showing the correlation between yield (tons of cane per hectare, TCH) from both plant cane and first ratoon, and normalized difference vegetation index (NDVI) from GreenSeeker sensor with regression. Source: Poudyal et al., 2023

Advanced Machine Learning for Sugarcane Yield Prediction

Country: ???? Brazil

Published: 23 August 2022

Using multispectral UAV images and machine learning algorithms, this study aims to accurately predict sugarcane biometric parameters, enhancing yield prediction capabilities.

The researchers utilized UAVs equipped with multispectral camera MicaSense RedEdge-M to capture images of sugarcane fields. They employed machine learning algorithms, specifically Multiple Linear Regression (MLR) and Random Forest (RF), to analyze these images and predict three key biometric parameters: number of tillers (NT), plant height (PH), and stalk diameter (SD). Data was collected from five sugarcane varieties over multiple time points to ensure robustness.

Key findings indicate that RF models outperformed MLR models, with higher R2 values for NT and PH (R2 > 0.70). The spectral bands Blue, Green, and NIR were the most effective predictors. The fusion of images from multiple time points (GDD = 349 and 397) provided the most accurate results, significantly improving sugarcane yield prediction accuracy.

Farmers and agronomists can practically apply these results to improve sugarcane yield predictions and optimize crop management.

Main Tools/Technologies:

  1. UAVs with multispectral cameras
  2. Machine Learning algorithms: Multiple Linear Regression (MLR) and Random Forest (RF)
  3. Spectral analysis of Blue, Green, and NIR bands
  4. Software: Agisoft Metashape, QGIS, Python with scikit-learn library

Illustrative example for data collection (flights, growing degree days, and biometric data) throughout the days after planting. Source: de Oliveira et al., 2022
Workflow of the data acquisition, image processing, and modeling process. Source: de Oliveira et al., 2022
Performance graph variables selection. (
Results of RF and MLR algorithms to predict the NT. Source: de Oliveira et al., 2022
Scatter plots of observed and predicted NT values for RF and MLR. The plots are based on the selection of three variables and combination of images collected at 349 and 397 GDD. Source: de Oliveira et al., 2022
Results of RF and MLR algorithms to predict the PH. Source: de Oliveira et al., 2022
Scatter plots of observed and predicted PH values for RF and MLR. The plots are based on the selection of three variables and combination of images collected at 349 and 397 GDD. Source: de Oliveira et al., 2022
Results of RF and MLR algorithms to predict the SD. Source: de Oliveira et al., 2022
Scatter plots of observed and predicted SD values for RF and MLR. The plots are based on the selection of three variables and the combination of images collected at 349, 397, and 410 GDD. Source: de Oliveira et al., 2022



??What's next in sugarcane tech?

In the next edition of "AI for Sugarcane" we would like to delve deeper into the topic of yield prediction. Additionally, we have pest and disease detection as two next directions for our work.

?What would you like to read about?

Share your thoughts in the comment below ??

If you find this newsletter useful, please, support it with your like or share to your colleagues ??

See you tomorrow!

Have a productive UAV flights over your sugarcane crops,

Maryna Kuzmenko , Chief Inspiration Officer at Petiole Pro

#sugarcane

Photo credit for the cover image:

Barbosa Júnior, M.R.; Tedesco, D.; Corrêa, R.d.G.; Moreira, B.R.d.A.; Silva, R.P.d.; Zerbato, C. Mapping Gaps in Sugarcane by UAV RGB Imagery: The Lower and Earlier the Flight, the More Accurate. Agronomy 2021, 11, 2578. https://doi.org/10.3390/agronomy11122578


References in "AI for Sugarcane"


Engr Jamshaid Amjad

Agricultural Engineer | Research Assistant | SAER Lab | Dept. of Agricultural Engineering, BZU Multan

5 个月

Good work

回复
Engr Abdul Manan

Engineer || AgTech || Precision Crop Protection Researcher || UAV's

5 个月

Good to know!

Oleksandr Khyzhniak ????

Strategy & Leadership | AI & Digital Transformation | PMP | Product Management | Veteran

5 个月

Great job! Brazilians are very experienced in this subject. I saw this firsthand in 2019 during my visit to Brazil's agri-coops.

Avinash Chandra Pandey

Crop Improvement Researcher

5 个月

Maryna Kuzmenko, Ph.D ???? excellent work. Can we apply the same technology to other crops also?

要查看或添加评论,请登录

Maryna Kuzmenko的更多文章

社区洞察

其他会员也浏览了